If you need a Steam debug version, you can post here and send me a friend request.

1st: https://gist.github.com/2d3519a25b2c95033503dbcadc3d86dd

2nd: https://gist.github.com/2e4d41d9baf0f3c3009203ee490f5343

3rd: https://gist.github.com/537ffe859ff9cecc93bf296bb1eb59ab

These are all with my normal mod set active, that worked previously, just in case it helps find an incompatibility. If you'd like me to do it again with only deep storage centric mods active, I can do that too.

Hmm.
There are two sets of mod.settings; the very bottom set is HugsLib's. There is a second set of Deep Storage settings there - can you check that the "Settings" category is actually checked?
If not, I'm afraid I will need it checked and run again ><
If it IS already checked....well, that will be very interesting.

Okay, so the setting wasnt checked so I went in and checked it and gathered the logs again.

1st: https://gist.github.com/04c340eca863201ce20a6b52868d28ab

2nd: https://gist.github.com/cf0c45761acb0eedbf3b31c1bfaaf641

3rd: https://gist.github.com/dbedfbfa05da26082257de7deb936bcb

Found one possible bug but I don't think it's affecting you? I will update that...and add more trace. Joy is.

It's certainly elusive. For reference, I only checked the debug for the "settings" option, the rest were left unchecked. If you need that changed or a different modset active, just let me know.

Fortunately it's still playable, I just swap in a local settings file before I launch and it'll work throughout that play session no problem. When I tested it yesterday, I found that I could access the main menu as many times as I want but it only occurred when I went into DeepStorage settings and exited, so possibly some kind of saving issue. If you want me to see if it effects other kinds of actions, i.e can I load into a save, quit, come back, load into a save, rinse and repeat and my settings maintain intact or not, let me know.

Hmm. Maybe this possible bug IS what's doing it!

I have updated the debug build:
https://github.com/lilwhitemouse/RimWorld-LWM.DeepStorage/releases/tag/v1.1.0.11-debug

Give it a go, if you would!

Will do. Would you like me to save my logs like last time?

Yes please!

Confirming that my settings are not resetting themselves as they used to be. Multiple launches and repeats of the same process that used to reset them has not reset them.

Well in that case, i don't think we need any logs :D