Here is the list of .pack files that should be active when the mod manager launches just before gameplay.

1_jupmod_global_upgrades.pack
1_Turn_Construction_LH.pack
1_Turn_Research.pack
aa.pack
additional_skillpoints_agents.pack
additional_skillpoints_generals.pack
ai_occupation_resistance.pack
Amazing_Agents_DLC.pack
building_exp.pack
camerazoom.pack
cf_doublefarms.pack
cf_projectiles_towers.pack
Clear_Dry_Weather.pack
CombatSkillBuffForGenerals.pack
Fourstrider_People.pack
gbj_blood_shogun_2.pack
Honor.pack
mod.pack
More_Ammo_LH.pack
No_Unique_Buildings_Cap.pack
Unlimited_Movement_(Navy_only)_LH.pack