Hello there!
First of all, author, let me compliment you on the mod as it adds variety and challenge to the main game.
That said, I encountered a bug with the advanced security (or was it the elite security?)
It's the one with the peripheral vision, although there are two types of those if I'm not mistaken.
I usually avoid, kill or incapacitate those guys, only thrice I tried to hack them.

So, while once was ok, the other two times were... less ok.
The first time, the map became bugged, whether I was in Incognita mode, or not, the whole map was portrayed as if I was in Incognita mode (everything blueish, sci-fi).
it asked me to reload the level because of an error (I didn't pay much attention to it at a time, just restarted).
Then there is the third time, I hacked a guy and again, the same bug with the map.
I tried to Save and Exit, then reload the game, but it just crashes with no popup whatsoever (bye bye Endless run).
This is only taking into consideration when I bring their value to 0 or less, hacking them 'slightly' doesn't seem to be the problem, it's when you hack them completely that the game goes haywire.

Could you look into that? Thanks.
If you need more info, just ask.
I also run some mods, but none that modify guards, except maybe Tweak UI and Guard portraits.
Here is my mod list :
http://puu.sh/p6NHI/ba230c5565.jpg
http://puu.sh/p6NHe/67781ad915.jpg