How do i do that?

First off I will say im still new to Blender.Im using Makehuman with Blender to make ny models and Rigs but i was following instructions on how to Rig your character but when i auto weighted it like it told me the Rig was above and a little behind the model. Is that suppose to happan? Heres a link to what i was followinghttp://cgi.tutsplus.com/tutorials/create-an-animation-walk-cycle-in-blender-using-rigify--cg-17812