So it's 1:50 and I just interacted with my bed...

[Sykomancer]

... But ended up passing out even after selecting the option to go to bed. Not a HUGE deal, but it still ends up an inconvenience the following day.

[Andromeda]

I've had this happen too, I can only think it's because the time kept ticking after saying go to bed which caused the issue of waking late.

IMO once you say yes to going to bed, time should not tick while getting to your bed.
You were walking into your bed and still woke up late? seems silly/bad.